Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788593.1_cds_XP_016470340.1_581
CDS Infomation

[gene=LOC107792538] [db_xref=GeneID:107792538] [protein=4-coumarate--CoA ligase-like 4 isoform X2] [protein_id=XP_016470340.1] [location=complement(join(25006..25068,25811..26197,26476..27495))] [gbkey=CDS]
Sequence

ATGTCAGGTGAGGAGGGATGGACTTCCACGGGCGAAGAAGAGGAATCCATGTACGATCGG
AAAAACGGCTACGATTCCAAGACTGGAATCTATCACTCAGTCCTCCAACTTAGTGAACAA
CACAAAATGCCTAGTGATAATCTTGATCTTGACACAGCCAAATTTGTGTTGTCACAATTT
CCATCCCCTGCTCAAGCTGAGTCACAAATAGCACTAATTGACTCTGCAAATAACCAGAAA
TTAACCTATGCTCAACTCCGTCGCGCTATCGCCTCACTTGCCACAGGATTATACCATGCA
CTAGGTGTTAGAAAAGGTGATGTTGTGTTTGTTTTGTCACCAAATTCACTTTTGTATCCG
ACTATATGTCTAGCTGTTCTTTCAGTTGGTGCTATATTATCCCCTGCCAATCCTCTTAAC
ACTGAATCAGAAATTTATAAACAAGTACGTTTATCGCGTGCAAAACTAGCCATTTCTGCA
CCAGAAGAAGTACATAAATTAGTCCGCACTGGTGTGCCAACTCTTCTCACAACTCGATCC
AAGAACGACGAAAATTCAGTTTCAGTAGAGGATTTGATTGAGAACTGTGACCCTTTAGAA
ATGCCAAAGGATAGACCAATGCTTTCGGATACAGCAGCAATACTATACTCTTCAGGAACC
ACTGGAGTTAGCAAAGGTGTAGTTTTGACTCATGCTAATTTTGTAGCAATTATGAAACTT
CTTAAGTTCTACGTCGATGTAACATCGTCTCAGGACGATGTTTTCCTCTGTTTCATACCG
ATGTTTCATGTATACGGTCTAGTCTTTTTCGGTCTGGGATTATTTTGTTCAGGTGTTACA
ACTGTGTTGATGCAAAAATTTGATTTCCAAGCAATGTTGGAAGCAGTTCAGACACACAAA
GTCAGTAACATTCCAGCAGTTGCACCAGTGATTCTCGGGCTAGTTAAGTATAATAAAGAT
AGTTATGACTTATCATCGTTGCGGAAGGTTTCCTCAGGAGCTGCACCACTGAGCAAAGAG
GTAGCTTATGCATTCCGGGAGAAGTTCCCTTGGGTGGAGCTCAAACAAGGCTATGGCCTA
ACTGAGACAACTGGTGCTGCTACATTTTTTGTTACCAATGAGGAGGCAAAGGCGCGTCCA
TGCTCAGTAGGGATGTTGTTCCCGAGCTTCTCCGCTAAGGTGGTTAATCACGATACAGGG
GAAGCATTGCCACCATTTAAGGAAGGTGAATTGTGGTTAAAAGGTCCAGGGGTGATGAAA
GAGTATTTCGGAAATGAGGAATCAACTGCTGCTACAATCACTGCTGATGGCTGGCTCCGA
ACTGGTGATCTTTGTTACTTTGACCACGAGGGGTATTTGTACATCGTTGATCGAATAAAG
GAACTCATCAAGCATAATGGTTATCAGACTAGAAGACGAGGAAGCAGGACAAATACCAGC
GGCATATGTTGTAAAAGCAGCTGGTTCTGA

Peptide Sequence

PEP ID

XP_016470340.1
PEP Infomation

PREDICTED: 4-coumarate--CoA ligase-like 4 isoform X2 [Nicotiana tabacum]
Sequence

MSGEEGWTSTGEEEESMYDRKNGYDSKTGIYHSVLQLSEQHKMPSDNLDLDTAKFVLSQF
PSPAQAESQIALIDSANNQKLTYAQLRRAIASLATGLYHALGVRKGDVVFVLSPNSLLYP
TICLAVLSVGAILSPANPLNTESEIYKQVRLSRAKLAISAPEEVHKLVRTGVPTLLTTRS
KNDENSVSVEDLIENCDPLEMPKDRPMLSDTAAILYSSGTTGVSKGVVLTHANFVAIMKL
LKFYVDVTSSQDDVFLCFIPMFHVYGLVFFGLGLFCSGVTTVLMQKFDFQAMLEAVQTHK
VSNIPAVAPVILGLVKYNKDSYDLSSLRKVSSGAAPLSKEVAYAFREKFPWVELKQGYGL
TETTGAATFFVTNEEAKARPCSVGMLFPSFSAKVVNHDTGEALPPFKEGELWLKGPGVMK
EYFGNEESTAATITADGWLRTGDLCYFDHEGYLYIVDRIKELIKHNGYQTRRRGSRTNTS
GICCKSSWF

Transcript Sequence

Gene sequence data has not been registered.